Structure of PDB 3ogm Chain F

Receptor sequence

>3ogmF (length=568) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]

SCVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALCY
TATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNL
RQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVT
HCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKD
LETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPE
KYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHC
TLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDE
EGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLV
LLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQY
SPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTK
LPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSRREHPAHILAYYSL
AGQRTDCPTTVRVLKEPI

3D structure

PDB

3ogm Jasmonate perception by inositol-phosphate-potentiated COI1-JAZ co-receptor.

Chain

Resolution

3.34 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	F	M88 F89 N90 E173 M201 E203 Y279 Y302 R326 E350 R351 G352 E359 D414 Y472 R496 G497	M77 F78 N79 E162 M190 E192 Y268 Y291 R315 E339 R340 G341 E348 D403 Y461 R485 G486
BS02	OGK	F	R85 F89 R348 V385 Y386 R409 L469 R496 W519	R74 F78 R337 V374 Y375 R398 L458 R485 W508

Gene Ontology

	Molecular Function
GO:0005515	protein binding

	Biological Process
GO:0006952	defense response
GO:0009611	response to wounding
GO:0009625	response to insect
GO:0009641	shade avoidance
GO:0009753	response to jasmonic acid
GO:0009861	jasmonic acid and ethylene-dependent systemic resistance
GO:0009867	jasmonic acid mediated signaling pathway
GO:0009901	anther dehiscence
GO:0009909	regulation of flower development
GO:0010118	stomatal movement
GO:0010218	response to far red light
GO:0016567	protein ubiquitination
GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031348	negative regulation of defense response
GO:0042742	defense response to bacterium
GO:0048364	root development
GO:0048443	stamen development
GO:0050832	defense response to fungus
GO:0106167	extracellular ATP signaling

	Cellular Component
GO:0019005	SCF ubiquitin ligase complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component

External links

PDB	RCSB:3ogm, PDBe:3ogm, PDBj:3ogm
PDBsum	3ogm
PubMed	20927106
UniProt	O04197\|COI1_ARATH Coronatine-insensitive protein 1 (Gene Name=COI1)

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