Structure of PDB 3nvk Chain F

Receptor sequence
>3nvkF (length=363) Species: 186497 (Pyrococcus furiosus DSM 3638) [Search protein sequence]
FISENVRGIYAFDENGNLIEKRYFTDKPEKVLDQLLKGEITKDLEELLNS
LKEKGYDEFVFEHPELSRRAKELGFSATTEFPNIAGERLRSNPEEFLGEN
WFEEYYKVGVALTRMRIQEQSGARDKMVIQAIEALDDVDKVINLLVARLR
EWYSLHFPELDELLPKHPQYVAFVKTVGHRDNINEEVLRELGLSEEKIKK
ILEAKEKTMGAWMDQTDIEVVRQLAEEIDRLYQLRKKLEDYIDRAMDDVA
PNLKALVGAKLAARLISLAGGLRELAMMPSSTIQVLGAEKALFRHLRTGA
KPPKHGVIYQYPAINRSPWWQRGKIARALAGKLAIAARVDYFSGEYIAEE
LKKELEARIRLVL
3D structure
PDB3nvk Structural basis for substrate placement by an archaeal box C/D ribonucleoprotein particle.
ChainF
Resolution3.209 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna F S288 T289 Q291 K311 G330 K331 R334 R365 S281 T282 Q284 K304 G323 K324 R327 R358
BS02 SAM F E352 Y353 E345 Y346
Gene Ontology
Molecular Function
GO:0005515 protein binding
GO:0030515 snoRNA binding
Cellular Component
GO:0031428 box C/D methylation guide snoRNP complex
GO:0032040 small-subunit processome

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Molecular Function
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Cellular Component
External links
PDB RCSB:3nvk, PDBe:3nvk, PDBj:3nvk
PDBsum3nvk
PubMed20864039
UniProtQ8U4M1

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