Structure of PDB 3flo Chain F

Receptor sequence
>3floF (length=180) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
DVERFKDTVTLELSCPSCDKRFPFGGIVSSNYYRVSYNGLQCKHCEQLFT
PLQLTSQIEHSIRAHISLYYAGWLQCDDSTCGIVTRQVSVFGKRCLNDGC
TGVMRYKYSDKQLYNQLLYFDSLFDCEKNKKQELKPIYLPDDLDYPKEQL
TESSIKALTEQNRELMETGRSVVQKYLNDC
3D structure
PDB3flo 3D architecture of DNA Pol alpha reveals the functional core of multi-subunit replicative polymerases
ChainF
Resolution2.5 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.7.7.7: DNA-directed DNA polymerase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN F C1287 C1290 C1314 C1317 C15 C18 C42 C45
BS02 ZN F C1348 C1353 C1367 C1372 C76 C81 C95 C100
Gene Ontology
Molecular Function
GO:0003887 DNA-directed DNA polymerase activity
Biological Process
GO:0006260 DNA replication

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:3flo, PDBe:3flo, PDBj:3flo
PDBsum3flo
PubMed19494830
UniProtP13382|DPOLA_YEAST DNA polymerase alpha catalytic subunit A (Gene Name=POL1)

[Back to BioLiP]