Structure of PDB 2xce Chain F

Receptor sequence
>2xceF (length=129) Species: 1423 (Bacillus subtilis) [Search protein sequence]
TMQIKIKYLDETQTRISKIEQGDWIDLRAAEDVTIKKDEFKLVPLGVAME
LPEGYEAHVVPRSSTYKNFGVIQTNSMGVIDESYKGDNDFWFFPAYALRD
TEIKKGDRICQFRIMKKMPAVELVEVEHL
3D structure
PDB2xce The Structure of the Genomic Bacillus Subtilis Dutpase: Novel Features in the Phe-Lid.
ChainF
Resolution1.85 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.6.1.23: dUTP diphosphatase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 DUP F N76 G79 V80 I81 Y85 W92 F93 N75 G78 V79 I80 Y84 W91 F92
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0004170 dUTP diphosphatase activity
GO:0016787 hydrolase activity
GO:0046872 metal ion binding
Biological Process
GO:0006226 dUMP biosynthetic process
GO:0009117 nucleotide metabolic process
GO:0046081 dUTP catabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:2xce, PDBe:2xce, PDBj:2xce
PDBsum2xce
PubMed20823546
UniProtO31801|YNCF_BACSU Deoxyuridine 5'-triphosphate nucleotidohydrolase YncF (Gene Name=yncF)

[Back to BioLiP]