Structure of PDB 2vq1 Chain F

Receptor sequence

>2vq1F (length=211) Species: 10090 (Mus musculus) [Search protein sequence]

QITLEESGPGILQPSQTLSLTCSFSGFSLSSSAMSVGWIRQPSGKGLEWL
AHIWWNDDKYYNPALKSRLTVSKDSSDNQVFLKIASVVTADTATYYCARI
PGFGFDYWGQGTTLTVSSATTTAPSVYPLVPSSVTLGCLVKGYFPEPVTV
KWNYGALSSGVRTVSSVLQSGFYSLSSLVTVPSSTWPSQTVICNVAHPAS
KTELIKRIEPR

3D structure

PDB

2vq1 Characterization of a Diagnostic Fab Fragment Binding Trimeric Lewis X.

Chain

Resolution

2.5 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	GLY	F	S41 A88 T108	S43 A93 T113
BS02	GLY	F	F146 G173 F174	F144 G171 F172

External links

PDB	RCSB:2vq1, PDBe:2vq1, PDBj:2vq1
PDBsum	2vq1
PubMed	19173313

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