Structure of PDB 2rdx Chain F

Receptor sequence
>2rdxF (length=369) Species: 89187 (Roseovarius nubinhibens ISM) [Search protein sequence]
SLRITRIRLYKTDLPYVDGSYGWGAGNAITVARASVVVIDTDAGLQGCGE
FTPCGENYMIAHSEGVDAFARLAAPQLLGQDPRQVARMERLMDHLVQGHG
YAKAPFDAAFWDILGQATGQPVWMLLGGKLCDGAPMYRVAPQRSEAETRA
ELARHRAAGYRQFQIKVGADWQSDIDRIRACLPLLEPGEKAMADANQGWR
VDNAIRLARATRDLDYILEQPCRSYEECQQVRRVADQPMKLDECVTGLHM
AQRIVADRGAEICCLKISNLGGLSKARRTRDFLIDNRMPVVAEDSWGGEI
ASAAVAHFAASTPEEFLINSTDLMNYNTRSTGLGGPTVHQGRLYASDTPG
LGVTPDFNSLGAPVADWAL
3D structure
PDB2rdx Crystal structure of mandelate racemase/muconate lactonizing enzyme from Roseovarius nubinhibens ISM.
ChainF
Resolution2.0 Å
3D
structure
Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Catalytic site (original residue number in PDB) Y20 V138 Q163 K165 D175 D193 E218 D241 E242 K265 E292 D293 S294 N318 S319 T320
Catalytic site (residue number reindexed from 1) Y21 V139 Q164 K166 D176 D194 E219 D242 E243 K266 E293 D294 S295 N319 S320 T321
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 MG F D193 E218 D241 D194 E219 D242
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:2rdx, PDBe:2rdx, PDBj:2rdx
PDBsum2rdx
PubMed
UniProtA3SNF8

[Back to BioLiP]