Structure of PDB 1vtl Chain F

Receptor sequence
>1vtlF (length=186) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
DLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIM
RIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKD
FKIQNIVGSCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVL
LIFVSGKIVITGAKMRDETYKAFENIYPVLSEFRKI
3D structure
PDB1vtl Co-Crystal Structure of TBP Recognizing the Minor Groove of a TATA Element
ChainF
Resolution2.25 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna F V29 F57 F74 S76 V80 Q116 N117 L147 F148 R154 V161 L163 T173 V17 F45 F62 S64 V68 Q104 N105 L135 F136 R142 V149 L151 T161
BS02 dna F Q26 N27 R56 F57 R63 T70 L72 T82 F148 P149 F165 S167 K169 V171 Q14 N15 R44 F45 R51 T58 L60 T70 F136 P137 F153 S155 K157 V159
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
Biological Process
GO:0006352 DNA-templated transcription initiation
Cellular Component
GO:0005634 nucleus

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Cellular Component
External links
PDB RCSB:1vtl, PDBe:1vtl, PDBj:1vtl
PDBsum1vtl
PubMed8413605
UniProtP28147|TBP1_ARATH TATA-box-binding protein 1 (Gene Name=TBP1)

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