Structure of PDB 1rb8 Chain F

Receptor sequence
>1rb8F (length=422) Species: 10849 (Escherichia phage alpha3) [Search protein sequence]
REIVDLSHLAFDCGMLGRLKTVSWTPVIAGDSFELDAVGALRLSPLRRGL
AIDSKVDFFTFYIPHRHVYGDQWIQFMRDGVNAQPLPSVTCNRYPDHAGY
VGTIVPANNRIPKFLHQSYLNIYNNYFRAPWMPERTEANPSNLNEDDARY
GFRCCHLKNIWSAPLPPETKLAEEMGIESNSIDIMGLQAAYAQLHTEQER
TYFMQRYRDVISSFGGSTSYDADNRPLLVMHTDFWASGYDVDGTDQSSLG
QFSGRVQQTFKHSVPRFFVPEHGVMMTLALIRFPPISPLEHHYLAGKSQL
TYTDLAGDPALIGNLPPREISYRDLFRDGRSGIKIKVAESIWYRTHPDYV
NFKYHDLHGFPFLDDAPGTSTGDNLQEAILVRHQDYDACFQSQQLLQWNK
QARYNVSVYRHMPTVRDSIMTS
3D structure
PDB1rb8 The phiX174 Protein J Mediates DNA Packaging and Viral Attachment to Host Cells.
ChainF
Resolution3.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide F I61 D62 F68 Y135 A138 P139 W140 C164 K167 N168 I169 Y211 F212 Q214 R215 R217 W244 R291 R353 I52 D53 F59 Y126 A129 P130 W131 C155 K158 N159 I160 Y202 F203 Q205 R206 R208 W235 R282 R344
BS02 dna F E208 F212 E199 F203
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Biological Process
GO:0046718 symbiont entry into host cell
Cellular Component
GO:0039615 T=1 icosahedral viral capsid

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:1rb8, PDBe:1rb8, PDBj:1rb8
PDBsum1rb8
PubMed15046981
UniProtP08767|CAPSD_BPAL3 Capsid protein F (Gene Name=F)

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