Structure of PDB 1m06 Chain F

Receptor sequence

>1m06F (length=422) Species: 10849 (Escherichia phage alpha3) [Search protein sequence]

REIVDLSHLAFDCGMLGRLKTVSWTPVIAGDSFELDAVGALRLSPLRRGL
AIDSKVDFFTFYIPHRHVYGDQWIQFMRDGVNAQPLPSVTCNRYPDHAGY
VGTIVPANNRIPKFLHQSYLNIYNNYFRAPWMPERTEANPSNLNEDDARY
GFRCCHLKNIWSAPLPPETKLAEEMGIESNSIDIMGLQAAYAQLHTEQER
TYFMQRYRDVISSFGGSTSYDADNRPLLVMHTDFWASGYDVDGTDQSSLG
QFSGRVQQTFKHSVPRFFVPEHGVMMTLALIRFPPISPLEHHYLAGKSQL
TYTDLAGDPALIGNLPPREISYRDLFRDGRSGIKIKVAESIWYRTHPDYV
NFKYHDLHGFPFLDDAPGTSTGDNLQEAILVRHQDYDACFQSQQLLQWNK
QARYNVSVYRHMPTVRDSIMTS

3D structure

PDB

1m06 Structural Studies of Bacteriophage alpha3 Assembly

Chain

Resolution

3.5 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	F	I61 D62 F68 Y135 F136 A138 P139 C164 K167 N168 I169 A172 Y211 F212 Q214 R215 W244 R291 P293 I350 D357	I52 D53 F59 Y126 F127 A129 P130 C155 K158 N159 I160 A163 Y202 F203 Q205 R206 W235 R282 P284 I341 D348
BS02	dna	F	K167 F212 R217 D218 S222 R234 T241 D242 F243 W244	K158 F203 R208 D209 S213 R225 T232 D233 F234 W235

Gene Ontology

	Molecular Function
GO:0005198	structural molecule activity

	Biological Process
GO:0046718	symbiont entry into host cell

	Cellular Component
GO:0039615	T=1 icosahedral viral capsid

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Molecular Function

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Biological Process

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Cellular Component

External links

PDB	RCSB:1m06, PDBe:1m06, PDBj:1m06
PDBsum	1m06
PubMed	12473449
UniProt	P08767\|CAPSD_BPAL3 Capsid protein F (Gene Name=F)

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