Structure of PDB 1ga5 Chain F

Receptor sequence
>1ga5F (length=78) Species: 9606 (Homo sapiens) [Search protein sequence]
VLLCKVCGDVASGFHYGVLACEGCKGFFRRSIQQNIQYKRCLKNENCSIV
RINRNRCQQCRFKKCLSVGMSRDAVRFG
3D structure
PDB1ga5 DNA Deformability as a Recognition Feature in the RevErb Response Element
ChainF
Resolution2.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna F G10 F11 H12 Y13 K22 R26 V71 R72 F73 G13 F14 H15 Y16 K25 R29 V75 R76 F77
BS02 dna F E19 R27 R50 N51 Q54 R57 F73 E22 R30 R54 N55 Q58 R61 F77
BS03 ZN F C1 C4 C18 C21 C4 C7 C21 C24
BS04 ZN F C37 C43 C53 C56 C41 C47 C57 C60
Gene Ontology
Molecular Function
GO:0003700 DNA-binding transcription factor activity
GO:0008270 zinc ion binding
GO:0043565 sequence-specific DNA binding
Biological Process
GO:0006355 regulation of DNA-templated transcription

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Molecular Function
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Biological Process
External links
PDB RCSB:1ga5, PDBe:1ga5, PDBj:1ga5
PDBsum1ga5
PubMed11669620
UniProtP20393|NR1D1_HUMAN Nuclear receptor subfamily 1 group D member 1 (Gene Name=NR1D1)

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