Structure of PDB 5tgm Chain E1

Receptor sequence
>5tgmE1 (length=71) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
KKVYTTPKKIKHKHKKVKLAVLSYYKVDAEGKVTKLRRECSNPTCGAGVF
LANHKDRLYCGKCHSVYKVNA
3D structure
PDB5tgm Molecular insights into protein synthesis with proline residues.
ChainE1
Resolution3.5 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 rna E1 K82 T87 K90 I91 K92 H93 K94 H95 K97 A101 V130 F131 A133 H135 R138 Y140 G142 K143 H145 S146 K149 K1 T6 K9 I10 K11 H12 K13 H14 K16 A20 V49 F50 A52 H54 R57 Y59 G61 K62 H64 S65 K68
BS02 ZN E1 C121 C141 C144 C40 C60 C63
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:5tgm, PDBe:5tgm, PDBj:5tgm
PDBsum5tgm
PubMed27827794
UniProtP05759|RS31_YEAST Ubiquitin-ribosomal protein eS31 fusion protein (Gene Name=RPS31)

[Back to BioLiP]