Structure of PDB 8yha Chain E

Receptor sequence

>8yhaE (length=375) Species: 1852835 (Candidatus Cloacimonetes bacterium ADurb.Bin088) [Search protein sequence]

MLIEIHMIQNHSPANLNRDDLGAPKTCYFGGVLRSRISSQCIKRSIRTSN
DFKALLGGVRTRRLADLIQQEAGETECWKKAQEILNKCGFKNKDDNTKML
VFMSKDKIKDLARIVLDNSLGLTEAAQQVANVIAQATLAPDIALCGRMLE
PNDKDKDKKVKWSNTTVEAALQVAHAISTHIARPEIDYFVAADDVPGEDA
GAGHIGESMFASACFYKYFSIDWEQLVKNLKGDTNLAAHTVGAFLLAAAK
TNPSGKQNSFAAHNYPDGILVEFKNSPISYANAFVRPVSVVKESDLVEQS
IGQLSNYVNDIRLGYYDEQSPVIGFWFSPNNRYPLGYKHSKLASRNIGNL
NELVGAVLDYIGGFKWEEVQKSKAY

3D structure

PDB

8yha Mechanisms for HNH-mediated target DNA cleavage in type I CRISPR-Cas systems

Chain

Resolution

3.4 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	E	N17 R18 C41 R44 M148 Y188 F189 V190 I205 K256	N17 R18 C41 R44 M148 Y188 F189 V190 I205 K256
BS02	dna	E	R62 M148 E150 N152 D153 A200 A202 H204 I205	R62 M148 E150 N152 D153 A200 A202 H204 I205

External links

PDB	RCSB:8yha, PDBe:8yha, PDBj:8yha
PDBsum	8yha
PubMed	39047725
UniProt	A0A1V6F8B5

[Back to BioLiP]