Structure of PDB 8xmc Chain E

Receptor sequence
>8xmcE (length=198) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
TEEELKRLYRIQKTLMQMLRDRGYFIADSELTMTKQQFIRKHGDNMKRED
LVTLKAKRNDNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVFRAILVVQ
QNLTPFARTCISEISSKFHLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKK
TLLERYTVKETQLPRIQVTDPIARYFGLKRGQVVKIIRPRYVTYRYVV
3D structure
PDB8xmc Transcription of the Plant RNA polymerase IV is prone to backtracking
ChainE
Resolution3.1 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna E G78 V79 T106 F108 G76 V77 T104 F106
Gene Ontology
Cellular Component
GO:0000418 RNA polymerase IV complex
GO:0000428 DNA-directed RNA polymerase complex
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005665 RNA polymerase II, core complex

View graph for
Cellular Component
External links
PDB RCSB:8xmc, PDBe:8xmc, PDBj:8xmc
PDBsum8xmc
PubMed
UniProtO81098|RPB5A_ARATH DNA-directed RNA polymerases II and IV subunit 5A (Gene Name=NRPB5A)

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