Structure of PDB 8vdu Chain E

Receptor sequence

>8vduE (length=187) Species: 9606 (Homo sapiens) [Search protein sequence]

SPEDFVYQFKGMCYFTNGTERVRLVTRYIYNREEYARFDSDVGVYRAVTP
LGPPAAEYWNSQKEVLERTRAELDTVCRHNYQLELRTTLQRRVEPTVTIS
PSTEALNHHNLLVCSVTDFYPAQIKVRWFRNDQEETTGVVSTPLIRNGDW
TFQILVMLEMTPQRGDVYTCHVEHPSLQNPIIVEWRA

3D structure

PDB

8vdu A structural basis of T cell cross-reactivity to a native and spliced self-antigens presented by HLA-DQ8

Chain

Resolution

3.5 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	E	F11 Y30 A57 W61 T77 H81 N82 L85	F9 Y28 A55 W59 T75 H79 N80 L83

External links

PDB	RCSB:8vdu, PDBe:8vdu, PDBj:8vdu
PDBsum	8vdu
PubMed	39074636
UniProt	O19707

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