Structure of PDB 8spo Chain E

Receptor sequence
>8spoE (length=380) Species: 429344 (Maribacter polysiphoniae) [Search protein sequence]
RNKIFISHATPDDNDFTRWLALKLIGLGYEVWCDILFLDKGVDFWSNIEK
VIREDTCKFLLVSSSYSNQREGVLKELAVAAKVKKQLKDDKFIIPLAIDE
QLSYDDINIDIVRLNAIDFKMSWARGLKDILEAFEKQKVPKEVADASKSN
LLYQQIFLVIEKEEIYDSNWLSILSFPEELRVRELTFPAVRYKNYLCTIR
IPTEEILSGSYDSNFIRNAECKRLIVQLLNKAFELRMKDKEVQEYEMSNK
TAYWLEKGKLEKDKFEKTMLVGKQKDKNWHFAISGASKLYPFPVLMISSH
IFFTADGKKLIDSSSVQHSSRRRQGKNWWNNTWRTKLLAFIKYLSDDDTS
FYLEMGSEEKVFVSNEPVKFKGNVSYNIPE
3D structure
PDB8spo Oligomerization-mediated activation of a short prokaryotic Argonaute.
ChainE
Resolution2.98 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna E K211 E260 S288 H340 R362 K193 E220 S248 H300 R322
BS02 dna E R201 R263 H358 K366 R183 R223 H318 K326
BS03 NAD E I7 H9 T11 W33 C34 D35 F45 W46 I49 R71 I6 H8 T10 W32 C33 D34 F44 W45 I48 R70
Gene Ontology
Biological Process
GO:0007165 signal transduction

View graph for
Biological Process
External links
PDB RCSB:8spo, PDBe:8spo, PDBj:8spo
PDBsum8spo
PubMed37494956
UniProtA0A316E683

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