Structure of PDB 8r6s Chain E

Receptor sequence
>8r6sE (length=1091) Species: 3728 (Sinapis alba) [Search protein sequence]
ANLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATS
ISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEIW
YATSEYLRQEMNPNFRMTDPFNPVHMMSFSGARGNASQVHQLVGMRGLMS
DPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTR
RLVEVVQHIVVRRTDCGTIRGISVSPRNKSRMMSERIFIQTLIGRVLADD
IYIGSRCVAFRNQDLGIGLVNRFITFGTQSISIRTPFTCRSTSWICRLCY
GRSPTHGDLVELGEAVGIIAGQSIGEPGAEHVRAPYNGKIKFNEDLVHPT
RTRHGHPAFLCYIDLSVIIESEDIIHSVTIPPKSFLLVQNDQYVESEQVI
AEIRERVRKYIYSDSEGEMHWSTDVSHAPEFTYSNVHLLPKTSHLWILSG
GSCGSSLILFSIHKDQDQMNIPFSDLLAKRRRNRFLIPISVEIPINGIFR
RNSIFAFFDDPRYRRKSSGILKYDRFFFIPEEVHILPESSAIMVENYSII
GVDTRITLNIRSQVGGLIRVERKKKRIELKIFSGDIHFPDKTDKISRHSG
ILIPPGKNWIYVQRITPTKKKFFVLVRPVATYEIADSINLATLFPKDLFR
EKDNIQLRVFNYILYGNGKPTRGISDTSIQLVRTCLVLNWVRAFFVEVNT
KGLIRDFIRIGLRKRNNPMNPFYHGTIRMFSLLILSSSNCFRIGTIKNSS
GPLGTAIQISNFYSFLPLLTYNQISVIKYLQLDNFKYIFQVIHSYLIDEN
GRIFNLDPYSNLVLNPFKLNWYFLHQNYNTIISLGQFFCENVCIAKKEPY
LKSGQVLIVQRDSVVIRSAKPYLATPGAKVHGHYREILYEGDTLVTFIYE
GLPKVEQVLEVSLNLEKRIKGWNRCITRILGIPWGFLIGAELTIVQSRIS
LVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEEGMSNVFLPGELIG
LLRAERTGRALEEAICYRAVLLGITRASLNTQSFISEASFQETARVLAKA
ALRGRIDWLKGLKENVVLGGVIPAGTGFNKGDILFYHREFC
3D structure
PDB8r6s Structure of the plant plastid-encoded RNA polymerase.
ChainE
Resolution2.49 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.7.7.6: DNA-directed RNA polymerase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN E C220 C293 C300 C303 C216 C289 C296 C299
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003899 DNA-directed 5'-3' RNA polymerase activity
GO:0008270 zinc ion binding
GO:0016779 nucleotidyltransferase activity
GO:0046872 metal ion binding
Biological Process
GO:0006351 DNA-templated transcription
Cellular Component
GO:0000428 DNA-directed RNA polymerase complex
GO:0009507 chloroplast

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8r6s, PDBe:8r6s, PDBj:8r6s
PDBsum8r6s
PubMed38428394
UniProtA0A6C0M829

[Back to BioLiP]