Structure of PDB 8q5i Chain E

Receptor sequence

>8q5iE (length=206) Species: 5476 (Candida albicans) [Search protein sequence]

AILSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKA
SNTQGVLGEQGRRIHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQA
EALKAKLLSGLPIRRAAYGVLRFAMGAGAKGVEVVISGKLRAARAKSQKY
ADGFMIHSGQPTRDFIDIAIRHVLMRQGVLGIKVKIMKDPAANRFGPRAL
PDAVKI

3D structure

PDB

8q5i Structural characterization of cephaeline binding to the eukaryotic ribosome using Cryo-Electron Microscopy

Chain

Resolution

2.45 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	E	I5 L6 S7 K8 K9 R28 S140 K142 L143 R144 A146 R147 A148 K152 F157 M158 I159 H160 S161 G162 Q163 I173 H175 L177 R179 Q180 G181 V182 G184 K186 P204 D205	I2 L3 S4 K5 K6 R25 S137 K139 L140 R141 A143 R144 A145 K149 F154 M155 I156 H157 S158 G159 Q160 I170 H172 L174 R176 Q177 G178 V179 G181 K183 P201 D202

Gene Ontology

	Molecular Function
GO:0003723	RNA binding
GO:0003735	structural constituent of ribosome

	Biological Process
GO:0006412	translation

	Cellular Component
GO:0005634	nucleus
GO:0005840	ribosome
GO:0015935	small ribosomal subunit
GO:0022627	cytosolic small ribosomal subunit
GO:1990904	ribonucleoprotein complex

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Molecular Function

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Biological Process

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Cellular Component

External links

PDB	RCSB:8q5i, PDBe:8q5i, PDBj:8q5i
PDBsum	8q5i
PubMed
UniProt	A0A8H6BYS1

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