Structure of PDB 8j7s Chain E

Receptor sequence

>8j7sE (length=454) Species: 429344 (Maribacter polysiphoniae) [Search protein sequence]

MKELIYIEEPKILFAHGQKCTDARDGLALFGPLNNLYGIKSGVIGTKQGL
KIFRDYLDHIQKPIYNSNSITRPMFPGFEAVFDCKWESTGITFKEVTNED
IGKFLYNSSTHKRTYDLVSLFIDKIISANKNEDENVDVWFVIVPDEIYKY
CRQFHDQFKARLLKHTIPTQIFRESTLAWRDFKNAFGLPIRDFSKIEGHL
AWTISTAAFYKAGGKPWKLSDVRNGVCYLGLVYKKVEKSKNPRNACCAAQ
MFLDNGDGTVFKGEVGPWYNPKNGQYHLEPKEAKALLSQSLQSYKEQIGE
YPKEVFIHAKTRFNHQEWDAFLEVTPKETNLVGVTISKTKPLKLYKTEGD
YTILRGNAYVVNERSAFLWTVGYVPKIQTALSMEVPNPLFIEINKGEADI
KQVLKDILSLTKLNYNACIFADGEPVTLRFADKIGEILTASTDIKTPPLA
FKYY

3D structure

PDB

8j7s Cryo-EM structure of the ssDNA-activated SPARTA complex.

Chain

Resolution

2.84 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	E	H207 K211 Q222 I223 R225 T228 R243 F245 H251 L252 T255 K263 N325 G326 K390 K395 N468 A469 D474 G475 R481	H155 K159 Q170 I171 R173 T176 R191 F193 H199 L200 T203 K211 N273 G274 K338 K343 N416 A417 D422 G423 R429
BS02	dna	E	S67 R72 K247 K286 K287 Y328 T363 R364	S67 R72 K195 K234 K235 Y276 T311 R312

Gene Ontology

	Molecular Function
GO:0003676	nucleic acid binding

View graph for
Molecular Function

External links

PDB	RCSB:8j7s, PDBe:8j7s, PDBj:8j7s
PDBsum	8j7s
PubMed	37491603
UniProt	A0A316E3U6

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