Structure of PDB 8ibd Chain E

Receptor sequence

>8ibdE (length=210) Species: 10090 (Mus musculus) [Search protein sequence]

FVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHQAAAVLPVLDLAQR
QNGWLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTT
PCMLRDSDSILETLQRKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQI
NDNYYEDLTPKDIEEIIDELKAGKVPKPGPRSGRFCCEPAGGLTSLTEPP
KGPGFGVQAG

3D structure

PDB

8ibd Respiratory complex CI:CIII2, type II, Wild type mouse under cold temperature

Chain

Resolution

4.2 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	E	N58 R61 A64 K67 N68 E71 R87	N21 R24 A27 K30 N31 E34 R50
BS02	FES	E	C134 T136 P138 C139 C175 A178 C179 M184	C97 T99 P101 C102 C138 A141 C142 M147

External links

PDB	RCSB:8ibd, PDBe:8ibd, PDBj:8ibd
PDBsum	8ibd
PubMed
UniProt	Q9D6J6\|NDUV2_MOUSE NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial (Gene Name=Ndufv2)

[Back to BioLiP]