Structure of PDB 8iaj Chain E

Receptor sequence
>8iajE (length=495) Species: 3702,559292 [Search protein sequence]
GHFFVEGLLGVVIIILLTRKSYKPPKRPLTEQEIDELCDEWVPEPLVDPS
ATDEQSWRVAKTPVTMEMPIQNHITITRNNLQEKYTNVFNLASNNFLQLS
ATEPVKEVVKTTIKNYGVGACGPAGFYGNQDVHYTLEYDLAQFFGTQGSV
LYGQDFCAAPSVLPAFTKRGDVIVADDQVSLPVQNALQLSRSTVYYFNHN
DMNSLECLLNELTEQEKLEKLPAIPRKFIVTEGIFHNSGDLAPLPELTKL
KNKYKFRLFVDETFSIGVLGATGRGLSEHFNMDRATAIDITVGSMATALG
STGGFVLGDSVMCLHQRIGSNAYCFSACLPAYTVTSVSKVLKLMDSNNDA
VQTLQKLSKSLHDSFASDDSLRSYVIVTSSPVSAVLHLQLTPAYRSRKFG
YTCEQLFETMSALQKKSQTNKFIEPYEEEEKFLQSIVDHALINYNVLITR
NTIVLKQETLPIVPSLKICCNAAMSPEELKNACESVKQSILACCQ
3D structure
PDB8iaj Collaborative regulation of yeast SPT-Orm2 complex by phosphorylation and ceramide.
ChainE
Resolution3.1 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.3.1.50: serine C-palmitoyltransferase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 PLP E S385 A386 S326 A327
Gene Ontology
Molecular Function
GO:0030170 pyridoxal phosphate binding
Biological Process
GO:0009058 biosynthetic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:8iaj, PDBe:8iaj, PDBj:8iaj
PDBsum8iaj
PubMed38285738
UniProtP25045|SPTC1_YEAST Serine palmitoyltransferase 1 (Gene Name=LCB1);
Q94IB8|SPTC1_ARATH Long chain base biosynthesis protein 1 (Gene Name=LCB1)

[Back to BioLiP]