Structure of PDB 8hyj Chain E

Receptor sequence
>8hyjE (length=209) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
LSKYVDLSSEESHRYYLARRNGLQMLRDRGYEVSDEDINLSLHDFRTVYG
ERPDVDRLRISALHRSDSTKKVKIVFFGTSMVKVNAIRSVVADILSQETI
TGLILVLQNHVTNQALKAIELFSFKVEIFQITDLLVNITKHSLKPQHQVL
NDEEKTTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELTE
SHVAFRCVW
3D structure
PDB8hyj A cryo-EM structure of KTF1-bound polymerase V transcription elongation complex.
ChainE
Resolution4.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna E M94 K96 M81 K83
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003899 DNA-directed 5'-3' RNA polymerase activity
GO:0005515 protein binding
Biological Process
GO:0006351 DNA-templated transcription
Cellular Component
GO:0000419 RNA polymerase V complex
GO:0005634 nucleus

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8hyj, PDBe:8hyj, PDBj:8hyj
PDBsum8hyj
PubMed37253723
UniProtQ9M1J2|RPE5A_ARATH DNA-directed RNA polymerase V subunit 5A (Gene Name=NRPE5A)

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