Structure of PDB 8gf5 Chain E

Receptor sequence
>8gf5E (length=247) Species: 188937 (Methanosarcina acetivorans C2A) [Search protein sequence]
AYEAQYYPGATSVGANRRKHMSGKLEKLREISDEDLTAVLGHRAPGSDYP
STHPPLAEMGEPACSIREAVAATPGAAAGDRVRYVQFADSMYNAPATPYF
RSYFAAINFRGVDPGTLSGRQIVEARERDMEQCAKVQMETEMTDPALAGM
RGATVHGHSVRLQEDGVMFDMLDRRRLEGGVIIMDKDQVAIPLDRKVNLG
KPMSSEEAAKRTTIYRVDNVAFRDDAEVIEWVHRVFDQRTSYGFQPK
3D structure
PDB8gf5 McrD binds asymmetrically to methyl-coenzyme M reductase improving active-site accessibility during assembly.
ChainE
Resolution3.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.8.4.1: coenzyme-B sulfoethylthiotransferase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 COM E L118 R121 L117 R120
BS02 F43 E L118 S119 G120 R121 A154 T155 V156 H159 L117 S118 G119 R120 A153 T154 V155 H158
Gene Ontology
Molecular Function
GO:0016740 transferase activity
GO:0050524 coenzyme-B sulfoethylthiotransferase activity
Biological Process
GO:0015948 methanogenesis

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Molecular Function
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Biological Process
External links
PDB RCSB:8gf5, PDBe:8gf5, PDBj:8gf5
PDBsum8gf5
PubMed37307484
UniProtQ8THH0

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