Structure of PDB 8f9w Chain E

Receptor sequence

>8f9wE (length=223) Species: 10090 (Mus musculus) [Search protein sequence]

QVQLVESGGNVVQPGRSLRLSCTASGFTFSSYGMHWVRQAPDKGLEWVAI
IWYDGGNKFYADSVKGRFTISRDNSKDTLYLQMNSLRAEDTAVYYCAKAW
YKIDDKYSMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCL
VKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT
QTYICNVNHKPSNTKVDKKVEPK

3D structure

PDB

8f9w Molecular determinants of cross-reactivity and potency by VH3-33 antibodies against the Plasmodium falciparum circumsporozoite protein

Chain

Resolution

2.4 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	E	S31 Y32 G33 W52 Y52A N56 F58 Y97 K100B Y100C	S31 Y32 G33 W52 Y53 N57 F59 Y101 K106 Y107

External links

PDB	RCSB:8f9w, PDBe:8f9w, PDBj:8f9w
PDBsum	8f9w
PubMed	38007690

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