Structure of PDB 8dp1 Chain E

Receptor sequence

>8dp1E (length=225) Species: 9544 (Macaca mulatta) [Search protein sequence]

EVQLAESGGGLTKPGGSLRLSCAASGFTFSDFYMDWVRQTPGKGLEWVSR
INNDGRNKWYADSVRGRFTVSRENAKNTLYLQMDSLRAEDTAVYYCARDR
PVYRYWSGGYHLDPWGQGVVVTVSSASTKGPSVFPLAPSSRSTSESTAAL
GCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSS
LGTQTYVCNVNHKPSNTKVDKRVEI

3D structure

PDB

8dp1 Shared recognition mechanism for HIV-1 envelope-reactive V3 glycan broadly neutralizing B cell lineage maturation in humans and macaques

Chain

Resolution

3.46 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	MAN	E	G109 H111	G109 H111
BS02	MAN	E	Y103 H111	Y103 H111

External links

PDB	RCSB:8dp1, PDBe:8dp1, PDBj:8dp1
PDBsum	8dp1
PubMed

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