Structure of PDB 8cqd Chain E

Receptor sequence
>8cqdE (length=220) Species: 86473 (uncultured Gammaproteobacteria bacterium) [Search protein sequence]
DLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGI
AFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAG
SLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEG
KSACNTASPAVQSAYNTMMYIIIFGWAIYPVGYFTGYLNLNLIYNLADFV
NKILFGLIIWNVAVKESSNA
3D structure
PDB8cqd Structural insights into proteorhodopsin biogenesis and retinal scavenging
ChainE
Resolution3.54 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 RET E W99 V103 G156 W198 Y201 K232 W77 V81 G134 W176 Y179 K202
External links
PDB RCSB:8cqd, PDBe:8cqd, PDBj:8cqd
PDBsum8cqd
PubMed39138159
UniProtQ6J4G7|PRRG_UNKP Green-light absorbing proteorhodopsin

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