Structure of PDB 7zke Chain E

Receptor sequence
>7zkeE (length=1623) Species: 209285 (Thermochaetoides thermophila) [Search protein sequence]
ATRLDRLVTILETGSTRLIRDTAVNQLADWQKQHPEELFNLLSRVVPYLR
HKDWETRTTAAKAIGKIIENAPLYDPNANFFRLESLDVATIVKYGRPLLR
GGPVDYNLAALDPQKRLAHLKKTLNGRLGLLGRVFEDEEMPVEEIEADDG
AEWPFERLCEFLKVDLFDPQWETRHGAAMGLREVIRVHGAGAGRRRGKTR
KENNDLNRQWLDDLAYRLLCVLMLDKFTDYSSDTSVAPIRETVGQTLGAV
LRHISVESVHAIYRLLYCMVTQEDLPSEQNMWAVCHGGMVGLRYVVAVRK
DLLLQDGDMIDGVVRCVMQGLGDIDDDVRSVSAATLIPMAKEFVMMRRSA
LDSLINIVWESLSNLGDDLSASTGKIMDLLATLCSFPEVLEAMKVSASQD
EERSFTLLVPRLYPFLRHTITSVRLAVLKALMTFANLGGETSQGWLNGRI
LRLIFQNIIVERDQDTLNMSLELWTTLVRRLAARDPAILADEFEAHAEPM
MQLALHPIGVPRHPIPMNPALFQKPSGGHDVDGHMIQGEVDLVGVDVLIR
SRISAAKAMGLIMSFIPTPRLASYDTAVLQALSSPYASTQLAAAMVIDEY
AKNCSTPEVASRFIEPLQKIIDLERPSHYRDLVTYVQRVRSASQQLINLF
RDHGKVSQGKLPTLAVVVQGEPEAGPGAFSIANAEKVVNEDFERLKRLMA
PGQRLIALPQLNEAREQTVEVIEEAKAAKEARDARIKAAAACALVAMKVL
PKKPSPLIKAIMDSIKTEENQELQSRSAATIARLVQLFTESGRRGPAEKV
VANLVKFSCVEVAETPEFPIHAHKTNVILSMQKAVKYAREAKAARITRRG
AKEALEILSKNFGAELLERVPTLRTFMEEPLVRAFSGDLPPEARDPENAF
GQEIVDAMSVIRTMTPTLHPALHPFVMQQVPLVIKALRSDLSVFRYMAAK
CMATICSVITVDGMTALVEKVLPSINNPLDLSFRQGAIEVIYHLIAVMGD
AILPYVIFLIVPVLGRMSDSDNQIRLIATTSFATLVKLVPLEAGIPDPPG
LSEELLKGRDRERTFIAQLLDPKKIEPFKIPVAIKAELRSYQQEGVNWLA
FLNKYHLHGILCDDMGLGKTLQTICIVASDHHQRAEEFARTGAPEVRKLP
SLIICPPTLSGHWQQEIKTYAPFLTVTAYVGSPAERRAMKDSLDKTDIVI
TSYDVCRNDIDVIEKYNWNYCVLDEGHLIKNPKAKITLAVKRLTSNHRLI
LTGTPIQNNVLELWSLFDFLMPGFLGAEKVFLDRFAKPIANSRYSKASSK
EQEAGALAIEALHKQVLPFLLRRLKEEVLNDLPPKILQNYYCDLSDLQRK
LFEDFTKREGKKITETAGRDDKEAKQHIFQALQYMRKLCNSPALVMKPGH
KAYEDTQKYLAKHGTTLEDPIHAPKLGALRDLLVDCGIGVEGTPIKPHRA
LIFCQMKEMLDMVQNTVLKQMLPSVSYLRLDGSVEANKRQDIVNKFNSDP
SYDVLLLTTSVGGLGLNLTGADTVIFVEHDWNPQKDLQAMDRAHRIGQKK
VVNVYRIITRGTLEEKILSLQRFKIDVDMVDIETGDVRRPGKKAAWLEGL
GELWDNAQYEESFDLDGFLKTMQ
3D structure
PDB7zke Structural basis for TBP displacement from TATA box DNA by the Swi2/Snf2 ATPase Mot1.
ChainE
Resolution3.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna E A1443 K1444 A1234 K1235
BS02 dna E P1392 R1395 D1413 N1417 Q1589 M1673 P1183 R1186 D1204 N1208 Q1380 M1456
BS03 ADP E G1327 K1328 T1329 L1330 Y1379 G1732 N1734 R1762 G1118 K1119 T1120 L1121 Y1170 G1515 N1517 R1545
BS04 BEF E E1434 G1462 G1732 Q1755 E1225 G1253 G1515 Q1538
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0004386 helicase activity
GO:0005524 ATP binding
GO:0016787 hydrolase activity
GO:0016887 ATP hydrolysis activity
GO:0017025 TBP-class protein binding
GO:0140658 ATP-dependent chromatin remodeler activity
Biological Process
GO:0006338 chromatin remodeling
Cellular Component
GO:0005634 nucleus

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7zke, PDBe:7zke, PDBj:7zke
PDBsum7zke
PubMed37106137
UniProtG0S6C0

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