Structure of PDB 7n6s Chain E

Receptor sequence
>7n6sE (length=147) Species: 272947 (Rickettsia prowazekii str. Madrid E) [Search protein sequence]
TIIEVKIKKLENFLGNLPEYATEHSAGMDLVAANEQSITIKVGSIQLIPT
GIAIALPESFEAQIRPRSGLAVKHGITVANSPGTIDADYRGEIKVLLINL
GNKDFIIEKGMRIAQMIIAKYERVLWAETSILTETMRGRGGFGSTGL
3D structure
PDB7n6s Crystal Structure of deoxyuridine 5'-triphosphate nucleotidohydrolase from Rickettsia prowazekii str. Madrid E in complex with 2'-deoxyuridine 5'-monophoephate (dUMP)
ChainE
Resolution1.75 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.6.1.23: dUTP diphosphatase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 UMP E N81 T85 I86 D87 Y90 K95 N80 T84 I85 D86 Y89 K94
BS02 UMP E R68 S69 R67 S68
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0004170 dUTP diphosphatase activity
GO:0016787 hydrolase activity
GO:0046872 metal ion binding
Biological Process
GO:0006226 dUMP biosynthetic process
GO:0009117 nucleotide metabolic process
GO:0046081 dUTP catabolic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:7n6s, PDBe:7n6s, PDBj:7n6s
PDBsum7n6s
PubMed
UniProtQ9ZDD2|DUT_RICPR Deoxyuridine 5'-triphosphate nucleotidohydrolase (Gene Name=dut)

[Back to BioLiP]