Structure of PDB 7lnp Chain E

Receptor sequence
>7lnpE (length=548) Species: 484018 (Phocaeicola plebeius DSM 17135) [Search protein sequence]
GTDVFKADSASIAQNYTIPEWFKDAKFGIFIHWGVYSVPAYGSEWYSRWM
YKEGHPINKYHVQTYGPLTKFGYKDFIPMFKAENFNADEWLAVVKSSGAQ
YIVPVAEHHDGFAMYSSTFNKWNAVDMGPKRDIIGELKEATKKAGLRFGL
SSHRCENAWFYEYGMETPSDVQDTTITLYGERLHEPEGQGMTPYCGKYEG
SNERSRRQFLMHTYELIDKYQPELIWFNWTVGKYPFQPTFYKFMAYYYNS
ALDWNKEVVVNTKFGYGDNIQVFDIERGKSDRIREYPWQTDTSVGKKSWS
YCVGEENKSPDHIIDDFVDIVSKNGNLLLNIGPKADGTITDEQKNVLAEI
GKWLKTNGEAIYGSRPWVIASEGHNEYTADDIRFTTCDNNLYAVSLAWTD
GSVTIKSLATKYCRNVEIESVEMLGSSEKIDYKMTDEGLVVNFPKNKPTE
YAHVFKIKLKGVVVSKPLYDKVDNGCLITVRVANHNAEDANVTLKSVVDG
NEVSTQVAVKAKSEQWVKMQNKDVKSFDDMSCKFYFNDNLTYENEFKK
3D structure
PDB7lnp Metabolism of a hybrid algal galactan by members of the human gut microbiome.
ChainE
Resolution2.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA E D347 D351 L445 Y500 D311 D315 L396 Y451
BS02 Y9Y E H68 E80 W81 H144 N264 E312 W335 H32 E44 W45 H108 N228 E276 W299
Gene Ontology
Molecular Function
GO:0004560 alpha-L-fucosidase activity
Biological Process
GO:0005975 carbohydrate metabolic process
GO:0006004 fucose metabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:7lnp, PDBe:7lnp, PDBj:7lnp
PDBsum7lnp
PubMed35289327
UniProtB5CYA5

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