Structure of PDB 6yrm Chain E

Receptor sequence
>6yrmE (length=223) Species: 273075 (Thermoplasma acidophilum DSM 1728) [Search protein sequence]
MKIFLDTANIDEIRTGVNWGIVDGVTTNPALISKEAVNGKKYGDIIREIL
KIVDGPVSVEVVSTKYEGMVEEARKIHGLGDNAVVKIPMTEDGLRAIKTL
SSEHINTNCTLVFNPIQALLAAKAGVTYVSPFVGRLDDIGEDGMQIIDMI
RTIFNNYIIKTQILVASIRNPIHVLRSAVIGADVVTVPFNVLKSLMKHPK
TDEGLAKFLEDWKKVSPDGKLIL
3D structure
PDB6yrm Large-scale motions underlie physical but not chemical steps in transaldolase mechanism: Substrate binding by conformational selection and rate-determining product release
ChainE
Resolution1.7 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) D6 E60 K86 T110 F132
Catalytic site (residue number reindexed from 1) D6 E60 K86 T110 F132
Enzyme Commision number 2.2.1.2: transaldolase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 F6R E D6 N28 K86 T110 S130 F132 R135 S167 D6 N28 K86 T110 S130 F132 R135 S167
Gene Ontology
Molecular Function
GO:0004801 transaldolase activity
GO:0016740 transferase activity
GO:0016832 aldehyde-lyase activity
Biological Process
GO:0005975 carbohydrate metabolic process
GO:0006098 pentose-phosphate shunt
Cellular Component
GO:0005737 cytoplasm

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Cellular Component
External links
PDB RCSB:6yrm, PDBe:6yrm, PDBj:6yrm
PDBsum6yrm
PubMed
UniProtQ9HKI3|TAL_THEAC Probable transaldolase (Gene Name=tal)

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