Structure of PDB 6yc1 Chain E

Receptor sequence
>6yc1E (length=273) Species: 308116 (Dokdonia eikasta) [Search protein sequence]
QELGNANFENFIGATEGFSEIAYQFTSAILTLGYAVMLAGLLYFILTIKN
VDKKFQMSNILSAVVMVSAFLLLYAQAQNWTSSFTFNEEVGRYFLDPSGD
LFNNGYRYLNWLIDVPMLLFQILFVVSLTTSKFSSVRNQFWFSGAMMIIT
GYIGQFYEVSNLTAFLVWGAISSAFFFHILWVMKKVINEGKEGISPAGQK
ILSNIWILFLISWTLYPGAYLMPYLTGVDGFLYSEDGVMARQLVYTIADV
SSKVIYGVLLGNLAITLSKNKEL
3D structure
PDB6yc1 Molecular mechanism of light-driven sodium pumping.
ChainE
Resolution2.2 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 NA E Y25 T83 F86 T87 Y23 T81 F84 T85
BS02 RET E W113 D116 V117 M149 S174 F178 W215 Y218 P219 Y222 S254 K255 W111 D114 V115 M147 S172 F176 W213 Y216 P217 Y220 S252 K253
Gene Ontology

View graph for
Cellular Component
External links
PDB RCSB:6yc1, PDBe:6yc1, PDBj:6yc1
PDBsum6yc1
PubMed32358514
UniProtN0DKS8

[Back to BioLiP]