Structure of PDB 6vu6 Chain E

Receptor sequence
>6vu6E (length=409) Species: 888807 (Streptococcus sanguinis SK1 = NCTC 7863) [Search protein sequence]
TDTTPPTITLPQEVIAYRGEEFEFFVETTDDSGRVNRVIVRNIEGADNST
YLDPNWIRYSTDNLSVPGNATPANPLRTRVYGIVPINHGVGPGDRYTKYV
RAEDAAGNITALVDKQSERFVLVIRPQTEKYTPQVPTLTYVQNANSLTQT
DKDAVIAAVKSANPNLPATSTYSVSENGTVTITYPDGSTDTIAAAQTVDT
DRVAPVFVDEGRDYIFYRGEEGTAELHFYDNSGKITNVNFAGDLAASSTY
NTLLGLGFTFNTPNINNPNNATEQNPLVTTIRGTIPKSLPAGPGGKYTFK
VRATDASGLTSEAKIFRIVFANQTDKYTPNNPGSLTGVLNPQQLSTSEKT
AIEEKVRAANTGNLPNNVQYVVNNDGSVTVIYPDDTPASRSRDTITADRT
VQDLRPRNS
3D structure
PDB6vu6 Tandem sialoglycan-binding modules in a Streptococcus sanguinis serine-rich repeat adhesin create target dependent avidity effects.
ChainE
Resolution2.1 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 SIA E T500 K547 T249 K296
BS02 GAL E I294 Y350 D365 I43 Y99 D114
BS03 SIA E D304 G344 R346 Y347 T348 D53 G93 R95 Y96 T97
BS04 CA E D253 T255 D281 D282 D355 D2 T4 D30 D31 D104
BS05 CA E T379 Y382 D441 T128 Y131 D190
BS06 CA E D452 V454 D481 N482 D556 D201 V203 D230 N231 D305
BS07 CA E T575 Y578 D644 T324 Y327 D393
External links