Structure of PDB 6vqo Chain E

Receptor sequence

>6vqoE (length=240) Species: 9606 (Homo sapiens) [Search protein sequence]

QVTQNPRYLITVTGKKLTVTCSQNMNHEYMSWYRQDPGLGLRQIYYSMNV
EVTDKGDVPEGYKVSRKEKRNFPLILESPSPNQTSLYFCASSIQQGADTQ
YFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPD
HVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQN
PRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRA

3D structure

PDB

6vqo Structural basis for oligoclonal T cell recognition of a shared p53 cancer neoantigen.

Chain

Resolution

3.0 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	E	Q96 Q97 A99 D100	Q94 Q95 A97 D98

External links

PDB	RCSB:6vqo, PDBe:6vqo, PDBj:6vqo
PDBsum	6vqo
PubMed	32518267

[Back to BioLiP]