Structure of PDB 6pte Chain E

Receptor sequence
>6pteE (length=275) Species: 9606 (Homo sapiens) [Search protein sequence]
GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAP
WIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG
CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAA
HVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT
LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVP
SGQEQRYTCHVQHEGLPKPLTLRWE
3D structure
PDB6pte Structure Based Prediction of Neoantigen Immunogenicity.
ChainE
Resolution1.901 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide E Y7 F9 E63 K66 V67 H70 T73 D77 T80 L81 Y84 R97 Y99 Y116 T143 W147 V152 Q155 Y159 T163 W167 Y171 Y7 F9 E63 K66 V67 H70 T73 D77 T80 L81 Y84 R97 Y99 Y116 T143 W147 V152 Q155 Y159 T163 W167 Y171
External links
PDB RCSB:6pte, PDBe:6pte, PDBj:6pte
PDBsum6pte
PubMed31555277
UniProtP04439|HLAA_HUMAN HLA class I histocompatibility antigen, A alpha chain (Gene Name=HLA-A)

[Back to BioLiP]