Structure of PDB 6pqx Chain E

Receptor sequence

>6pqxE (length=480) Species: 7113 (Helicoverpa zea) [Search protein sequence]

STIFSPEKALGLLLSLKLSKWQYITLRETTIREGSKEIYPSYYKVQKAKL
QCYPPKAFVAVTDSSAKIALQALLDLTVNRIFETIRSPDAIQNKQLILIS
KWGFDGASNQSRYKQNIESGQGDSSIFMTSLVPLKLTADGDTVWVNPKPC
SPMYCRPVQFSFVKETKDVVINEKTAMDDEIEALVPSKCQGHEISHKLMM
TMIDGKICTYLSEAKSNAACYLCLAKPTEMSKLDVIASKTISSGVYEFGL
STLHARINVMECLLHIAYRLDFKKWSARGEGHQELLHSRKKLIQDRFKDD
LNLLIDIVKQGSGTTNDGNTARRFFEFPDKTAAITGLDEDLIRRFSVILQ
AITSGEIIDVPKFKEYARTTAEKYVELYDWYYMSSTVHKLLIHGGDIIAE
NAIVPIGSLSEEASEARNKDFRRFREHHSRKKSRQASNEDILNMLIISSD
PLISFTRPKLDAHKRQTYFKETVELLQLQD

3D structure

PDB

6pqx Structures of a RAG-like transposase during cut-and-paste transposition.

Chain

Resolution

4.6 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	dna	E	S39 K40 Y62 H448 S449 R450 K451	S19 K20 Y42 H428 S429 R430 K431
BS02	dna	E	S61 Y63 K64 K67 Y133 K134 Q135 K452	S41 Y43 K44 K47 Y113 K114 Q115 K432
BS03	dna	E	K226 H274 R289 A297 R298 S332 G333	K206 H254 R269 A277 R278 S312 G313
BS04	dna	E	C170 S171 R342 T373 K484 R485 Q486 T487	C150 S151 R322 T353 K464 R465 Q466 T467
BS05	dna	E	K235 W295 R298 V328 D337 G338 N339 R343 E432 E435 K439 R442	K215 W275 R278 V308 D317 G318 N319 R323 E412 E415 K419 R422
BS06	CA	E	D125 G126 A127 E435	D105 G106 A107 E415

Gene Ontology

	Molecular Function
GO:0046872	metal ion binding

View graph for
Molecular Function

External links

PDB	RCSB:6pqx, PDBe:6pqx, PDBj:6pqx
PDBsum	6pqx
PubMed	31723264
UniProt	B0F0C5

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