Structure of PDB 6plp Chain E

Receptor sequence
>6plpE (length=346) Species: 7955 (Danio rerio) [Search protein sequence]
PMPPSEFLDKLMGKVSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTM
DYRVNIFLRQQWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGA
NFHEVTTDNKLLRISKNGNVLYSIRITLVLACPMDLKNFPMDVQTCIMQL
ESYGFTMNDLIFEWDEKGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGK
FTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLG
ITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF
IARQHVEEMRKLFISRAKRIDTVSRVAFPLVFLIFNIFYWITYKII
3D structure
PDB6plp Mechanism of gating and partial agonist action in the glycine receptor.
ChainE
Resolution3.3 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ABU E S174 Y175 F223 S152 Y153 F201
BS02 ABU E F79 R81 S145 F57 R59 S123
Gene Ontology
Molecular Function
GO:0004888 transmembrane signaling receptor activity
GO:0005216 monoatomic ion channel activity
GO:0005230 extracellular ligand-gated monoatomic ion channel activity
GO:0016594 glycine binding
GO:0016934 extracellularly glycine-gated chloride channel activity
GO:0022824 transmitter-gated monoatomic ion channel activity
Biological Process
GO:0006811 monoatomic ion transport
GO:0006821 chloride transport
GO:0034220 monoatomic ion transmembrane transport
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0045211 postsynaptic membrane

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6plp, PDBe:6plp, PDBj:6plp
PDBsum6plp
PubMed33567265
UniProtO93430|GLRA1_DANRE Glycine receptor subunit alphaZ1 (Gene Name=glra1)

[Back to BioLiP]