Structure of PDB 6o3g Chain E

Receptor sequence

>6o3gE (length=227) Species: 9606 (Homo sapiens) [Search protein sequence]

EVQLVQSGGEVKRPGSSVTVSCKATGGTFSTLAFNWVRQAPGQGPEWMGG
IVPLFSIVNYGQKFQGRLTIRADKSTTTVFLDLSGLTSADTATYYCAREG
EGWFGKPLRAFEFWGQGTVITVSSASTKGPSVFPLAPSSKSTSGGTAALG
CLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSL
GTQTYICNVNHKPSNTKVDKKVEPKSC

3D structure

PDB

6o3g An MPER antibody neutralizes HIV-1 using germline features shared among donors.

Chain

Resolution

3.645 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	E	L32 A33 G50 I51 V52 I56 N58 E95 F100 G100A K100B P100C R100E	L32 A33 G50 I51 V52 I57 N59 E99 F104 G105 K106 P107 R109

External links

PDB	RCSB:6o3g, PDBe:6o3g, PDBj:6o3g
PDBsum	6o3g
PubMed	31772165

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