Structure of PDB 6nzo Chain E

Receptor sequence
>6nzoE (length=102) Species: 8355 (Xenopus laevis) [Search protein sequence]
GGVMKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDL
RFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRG
ER
3D structure
PDB6nzo Nucleosome and ubiquitin position Set2 to methylate H3K36.
ChainE
Resolution3.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 dna E R42 R72 R83 F84 V117 T118 R10 R40 R51 F52 V85 T86
BS02 dna E G44 V46 A47 R63 L65 P66 R69 G12 V14 A15 R31 L33 P34 R37
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005694 chromosome

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:6nzo, PDBe:6nzo, PDBj:6nzo
PDBsum6nzo
PubMed31439846
UniProtP02302|H3C_XENLA Histone H3.3C (Gene Name=h3-5)

[Back to BioLiP]