Structure of PDB 6hma Chain E

Receptor sequence

>6hmaE (length=206) Species: 1280 (Staphylococcus aureus) [Search protein sequence]

ANYDVLKLDGTKSGSIELSDAVFGIEPNNSVLFEAINLQRASLRQGTHAV
KNRSAVSGGGRKPWKQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYAYKM
PKKMRRLALRSALSFKAQENGLTVVDAFNFEAPKTKEFKNVLSTLEQPKK
VLVVTENEDVNVELSARNIPGVQVTTAQGLNVLDITNADSLVITEAAAKK
VEEVLG

3D structure

PDB

6hma Structural insights into species-specific features of the ribosome from the pathogen Staphylococcus aureus

Chain

Resolution

2.65 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	E	Q40 R41 S43 R45 Q46 T48 N53 R54 S55 S58 R62 K63 Q67 K68 G69 G71 R72 R74 G76 Q82 W83 R84 I88 V89 F90 R95 K100 K103 K104 R106 T136 K151 L165 R168 N169	Q39 R40 S42 R44 Q45 T47 N52 R53 S54 S57 R61 K62 Q66 K67 G68 G70 R71 R73 G75 Q81 W82 R83 I87 V88 F89 R94 K99 K102 K103 R105 T135 K150 L164 R167 N168

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome
GO:0019843	rRNA binding

	Biological Process
GO:0006412	translation

	Cellular Component
GO:0005840	ribosome
GO:1990904	ribonucleoprotein complex

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Molecular Function

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Biological Process

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Cellular Component

External links

PDB	RCSB:6hma, PDBe:6hma, PDBj:6hma
PDBsum	6hma
PubMed
UniProt	Q2FW07\|RL4_STAA8 Large ribosomal subunit protein uL4 (Gene Name=rplD)

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