Structure of PDB 6g9r Chain E

Receptor sequence

>6g9rE (length=276) Species: 10090 (Mus musculus) [Search protein sequence]

GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAP
WMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSG
CDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQS
GAAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVT
LRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVP
LGKEQNYTCRVYHEGLPEPLTLRWEP

3D structure

PDB

6g9r Structural basis for CD8+ T cells auto-reactivity in LCMV infection

Chain

Resolution

2.7 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	E	Y7 Y59 R62 E63 K66 Q70 W73 S77 L81 Y84 Q97 S99 Y123 T143 K146 W147 H155 Y156 Y159 W167 Y171	Y7 Y59 R62 E63 K66 Q70 W73 S77 L81 Y84 Q97 S99 Y123 T143 K146 W147 H155 Y156 Y159 W167 Y171

External links

PDB	RCSB:6g9r, PDBe:6g9r, PDBj:6g9r
PDBsum	6g9r
PubMed
UniProt	P01899\|HA11_MOUSE H-2 class I histocompatibility antigen, D-B alpha chain (Gene Name=H2-D1)

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