Structure of PDB 6f2s Chain E

Receptor sequence
>6f2sE (length=195) Species: 44560 (Ageratum yellow vein virus) [Search protein sequence]
PDVPKGCEGPCKVQSYEQRHDISHVGKVLCVSDVTRGNGLTHRVGKRFCV
KSVYVLGKIWMDENIKTKNHTNTVMFYLVRDRRPFGTAMDFGQVFNMYDN
EPSTATIKNDLRDRYQVLRKFTSTVTGGQYASKEQALVKKFMKINNYVVY
NHQEAAKYDNHTENALLLYMACTHASNPVYATLKIRIYFYDSVQN
3D structure
PDB6f2s The 3.3 angstrom structure of a plant geminivirus using cryo-EM.
ChainE
Resolution3.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna E C73 K113 Y116 F203 R248 Y250 C11 K51 Y54 F141 R186 Y188
BS02 dna E R142 R144 R174 D175 Q178 V179 R181 K182 R80 R82 R112 D113 Q116 V117 R119 K120
BS03 dna E R109 N257 R47 N195
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Cellular Component
GO:0019028 viral capsid

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Molecular Function
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Cellular Component
External links
PDB RCSB:6f2s, PDBe:6f2s, PDBj:6f2s
PDBsum6f2s
PubMed29915210
UniProtW5RUR4

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