Structure of PDB 6dmf Chain E

Receptor sequence
>6dmfE (length=517) Species: 411476 (Bacteroides ovatus ATCC 8483) [Search protein sequence]
IDPNAQLTTAQLQTYGDLSMMEIYRNYHYAFTQQLMGCWNTTNYGGRHTL
DNNEMSRIWTSFYTQSLKNIIDAQYRTAEDAEKVNINSVLRIYRVYLMSI
ITDTYGDAPFSEAGLGGKFNPKYDKQEDIYNAFFLELEDAVNKIDPTKDK
VTGDLIYAGDVTKWQQLANSLRLRFAMRISSVNPTKAQTEFENALAANGG
VITDASSDALIKYMTIAFSFGQEAYSDYRGNSLSQLLFGNDPANNPSYLC
STFFNQLYNSGDPRTFKISRCYYDGLMSATSPDNRVDITQEMIEKGIAFS
PRDPGAYSWEPWPTGYDSDICAELAVNNPSVTATMAREVEPKLANNFLKS
DNPGVVMTSAEVKFLMAEATVKKWNVGSVSAEDLYKQGVRAAIDFLTDNY
GCTATTDAEFDAFIQDKGAFGHTDNQKLEAINTQAWILHFTNPAECWANV
RRSGYPKLKSPAEYGFGQYLTGGTEIPVRLCYPVLESSYNKKSYNEAIER
MGGTDNWHSLLWWDTEN
3D structure
PDB6dmf Surface glycan-binding proteins are essential for cereal beta-glucan utilization by the human gut symbiont Bacteroides ovatus.
ChainE
Resolution2.4 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 BGC E E60 R95 E22 R57
BS02 BGC E N78 N281 N40 N240
BS03 BGC E W77 D282 W39 D241
BS04 MG E R492 D555 E557 R451 D514 E516
External links