Structure of PDB 6bnl Chain E

Receptor sequence
>6bnlE (length=260) Species: 10090 (Mus musculus) [Search protein sequence]
NYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQG
KLSNQQWEKLQHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSAGCEM
YPGNASESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQGT
SATVQMLLNDTCPLFVRGLLEAGKSDLEKQEKPVAWLSSVQLVCHVSGFY
PKPVWVMWMRGDQEQQGTHRGDFLPNADETWYLQATLDVAGLACRVKHSS
LGGQDIILYW
3D structure
PDB6bnl Dual Modifications of alpha-Galactosylceramide Synergize to Promote Activation of Human Invariant Natural Killer T Cells and Stimulate Anti-tumor Immunity.
ChainE
Resolution2.6 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 QWV E V30 M69 Y73 S76 D80 L100 L150 D153 G155 T156 T159 F171 V24 M63 Y67 S70 D74 L94 L144 D147 G149 T150 T153 F165
External links
PDB RCSB:6bnl, PDBe:6bnl, PDBj:6bnl
PDBsum6bnl
PubMed29576533
UniProtP11609|CD1D1_MOUSE Antigen-presenting glycoprotein CD1d1 (Gene Name=Cd1d1)

[Back to BioLiP]