Structure of PDB 6bnk Chain E

Receptor sequence
>6bnkE (length=272) Species: 10090 (Mus musculus) [Search protein sequence]
YTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGK
LSNQQWEKLQHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSAGCEMY
PGNASESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQGTS
ATVQMLLNDTCPLFVRGLLEAGKSDLEKQEKPVAWLSSVPSSAHGHRQLV
CHVSGFYPKPVWVMWMRGDQEQQGTHRGDFLPNADETWYLQATLDVEAGE
EAGLACRVKHSSLGGQDIILYW
3D structure
PDB6bnk Dual Modifications of alpha-Galactosylceramide Synergize to Promote Activation of Human Invariant Natural Killer T Cells and Stimulate Anti-tumor Immunity.
ChainE
Resolution3.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 AGH E F10 Q14 S28 V30 W63 L66 F70 Y73 S76 F77 D80 I81 L84 F120 W133 L150 D153 T156 C168 F3 Q7 S21 V23 W56 L59 F63 Y66 S69 F70 D73 I74 L77 F113 W126 L143 D146 T149 C161
External links
PDB RCSB:6bnk, PDBe:6bnk, PDBj:6bnk
PDBsum6bnk
PubMed29576533
UniProtP11609|CD1D1_MOUSE Antigen-presenting glycoprotein CD1d1 (Gene Name=Cd1d1)

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