Structure of PDB 6b1t Chain E

Receptor sequence
>6b1tE (length=914) Species: 28285 (Human adenovirus 5) [Search protein sequence]
ATPSMMPQWSYMHISGQDASEYLSPGLVQFARATETYFSLNNKFRNPTVA
PTHDVTTDRSQRLTLRFIPVDREDTAYSYKARFTLAVGDNRVLDMASTYF
DIRGVLDRGPTFKPYSGTAYNALAPKGAPNPCEWDEAQKTHVFGQAPYSG
INITKEGIQIGVEGQTPKYADKTFQPEPQIGESQWYETEINHAAGRVLKK
TTPMKPCYGSYAKPTNENGGQGILVKQLESQVEMQFFSTTEATNLTPKVV
LYSEDVDIETPDTHISYMPTIKEGNSRELMGQQSMPNRPNYIAFRDNFIG
LMYYNSTGNMGVLAGQASQLNAVVDLQDRNTELSYQLLLDSIGDRTRYFS
MWNQAVDSYDPDVRIIENHGTEDELPNYCFPLGGVINTETLTKVKPKTNG
WEKDATEFSDKNEIRVGNNFAMEINLNANLWRNFLYSNIALYLPDKLKYS
PSNVKISDNPNTYDYMNKRVVAPGLVDCYINLGARWSLDYMDNVNPFNHH
RNAGLRYRSMLLGNGRYVPFHIQVPQKFFAIKNLLLLPGSYTYEWNFRKD
VNMVLQSSLGNDLRVDGASIKFDSICLYATFFPMAHNTASTLEAMLRNDT
NDQSFNDYLSAANMLYPIPANATNVPISIPSRNWAAFRGWAFTRLKTKET
PSLGSGYDPYYTYSGSIPYLDGTFYLNHTFKKVAITFDSSVSWPGNDRLL
TPNEFEIKRSVDGEGYNVAQCNMTKDWFLVQMLANYNIGYQGFYIPESYK
DRMYSFFRNFQPMSRQVVDDTKYKDYQQVGILHQHNNSGFVGYLAPTMRE
GQAYPANFPYPLIGKTAVDSITQKKFLCDRTLWRIPFSSNFMSMGALTDL
GQNLLYANSAHALDMTFEVDPMDEPTLLYVLFEVFDVVRVHRPHRGVIET
VYLRTPFSAGNATT
3D structure
PDB6b1t Atomic Structures of Minor Proteins VI and VII in Human Adenovirus.
ChainE
Resolution3.2 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide E G17 D19 E22 P48 T49 V50 P52 D55 V56 T629 N644 Y646 L647 S648 R676 R872 A884 F923 G16 D18 E21 P47 T48 V49 P51 D54 V55 T591 N606 Y608 L609 S610 R638 R834 A846 F885
BS02 peptide E A20 E36 N42 R46 N47 T49 A19 E35 N41 R45 N46 T48
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Biological Process
GO:0046718 symbiont entry into host cell
GO:0075521 microtubule-dependent intracellular transport of viral material towards nucleus
Cellular Component
GO:0019028 viral capsid
GO:0039623 T=25 icosahedral viral capsid
GO:0042025 host cell nucleus
GO:0043657 host cell

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6b1t, PDBe:6b1t, PDBj:6b1t
PDBsum6b1t
PubMed28978703
UniProtP04133|CAPSH_ADE05 Hexon protein (Gene Name=L3)

[Back to BioLiP]