Structure of PDB 5z2c Chain E

Receptor sequence
>5z2cE (length=433) Species: 9606 (Homo sapiens) [Search protein sequence]
NNQKVVAVLLQECKQVLDQLLLEAPDVSEEDKSEDQRCRALLPSELRTLI
QEAKEMKWPFVPEWQYLKDVIGAGLQQLLASLRASILARDCAAAAAIVFL
VDRFLYGLDVSGKLLQVAKGLHKLQPATPIAPQVVIRQARISVNSGKLLK
AEYILSSLISNNGATGTWLYRNESDKVLVQSVCIQIRGQILQKLGMWYEA
AELIWASIVGYLALPQPDKKGLSTSLGILADIFVSMSKNDYEKFKNNPQI
NLSLLKEFDHHLLSAAEACKLAAAFSAYTPLFVLTAVNIRGTCLLSYSSS
NDCPPELKNLHLCEAKEAFEIGLLTKRDDEPVTGKQELHSFVKAAFGLTT
VHRRLHGETGTVHAASQLCKEAMGKLYNFSTSSRSQDREALSQEVMSVIA
QVKEHLQVQSFSNVDDRSYVPESFECRLDKLIL
3D structure
PDB5z2c Alpha-kinase 1 is a cytosolic innate immune receptor for bacterial ADP-heptose.
ChainE
Resolution2.594 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.7.11.1: non-specific serine/threonine protein kinase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 AYU E F61 R116 Y119 Q146 R150 R153 V195 Q198 Y224 D231 K233 G234 S236 T237 F295 F60 R103 Y106 Q133 R137 R140 V182 Q185 Y211 D218 K220 G221 S223 T224 F282
Gene Ontology
Molecular Function
GO:0004674 protein serine/threonine kinase activity

View graph for
Molecular Function
External links
PDB RCSB:5z2c, PDBe:5z2c, PDBj:5z2c
PDBsum5z2c
PubMed30111836
UniProtQ96QP1|ALPK1_HUMAN Alpha-protein kinase 1 (Gene Name=ALPK1)

[Back to BioLiP]