Structure of PDB 5vmm Chain E

Receptor sequence
>5vmmE (length=329) Species: 1280 (Staphylococcus aureus) [Search protein sequence]
SNQELREAIKNPAIKDKDHSAPNSRPIDFEMKKENGEQQFYHYASSVKPA
RVIFTDSKPEIELGLQSGQFWRKFEVYEGDKKLPIKLVSYDTVKDYAYIR
FSVSNGTKAVKIVSSTHFNNKEEKYDYTLMEFAQPIYNSADKFKTEEDYK
AEKLLAPYKKAKTLERQVYELNKIQDKLPEKLKAEYKKKLEDTKKALDEQ
VKSAITEFQNVQPTNEKMTDLQDTKYVVYESVENNESMMDTFVKHPIKTG
MLNGKKYMVMETTNDDYWKDFMVEGQRVRTISKDAKNNTRTIIFPYVEGK
TLYDAIVKVHVKTIDYDGQYHVRIVDKEA
3D structure
PDB5vmm Structure-function analyses reveal key features in Staphylococcus aureus IsdB-associated unfolding of the heme-binding pocket of human hemoglobin.
ChainE
Resolution3.6 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 HEM E E354 S361 M362 Y444 E230 S237 M238 Y320
External links
PDB RCSB:5vmm, PDBe:5vmm, PDBj:5vmm
PDBsum5vmm
PubMed29109153
UniProtQ7A656|ISDB_STAAN Iron-regulated surface determinant protein B (Gene Name=isdB)

[Back to BioLiP]