Structure of PDB 5oea Chain E

Receptor sequence
>5oeaE (length=408) Species: 749413 (Deep-sea thermophilic phage D6E) [Search protein sequence]
YFQPFSKKQLKVLTWWRKASPVSDKDGIICDGSIRAGKTIVMSFSYVMWA
MDTFNEQNFGMAGKTIGALRRNVITPLKRMLKSRGYRVKDHRADNYLTIT
FKGKTNYFYLFGGKDESSQDLIQGITLAGMFFDEVALMPESFVNQATARC
SVDGAKLWFNCNPAGPYHWFKVEYLDKLDEKNLLHLHFTMDDNLSLSKQV
KERYQRMYKGVFYQRYILGLWVLAEGIIYDMFDQDEHVVPTVPRPYEKYY
VSCDYGTQNPTTFGLWGLYNGVWYKVKEYHYDGRKENKQKTDQEYYEDLM
KFIEDIEKHKFKGVIVDPSAASFIALLRQKGIKVIKAKNDVLDGIRNVAT
ALNKKMILYNDCCKETFREYSSYVWDEKAAERGEDKPVKQNDHQLDADRY
FVNTILFG
3D structure
PDB5oea Structure of the large terminase from a hyperthermophilic virus reveals a unique mechanism for oligomerization and ATP hydrolysis.
ChainE
Resolution3.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 AGS E Q12 F14 I43 R44 A45 G46 K47 T48 I49 N171 N202 S204 Q3 F5 I34 R35 A36 G37 K38 T39 I40 N162 N193 S195
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:5oea, PDBe:5oea, PDBj:5oea
PDBsum5oea
PubMed29069443
UniProtE5DV50

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