Structure of PDB 5mqp Chain E

Receptor sequence
>5mqpE (length=602) Species: 818 (Bacteroides thetaiotaomicron) [Search protein sequence]
LSAGEIWISPQGNDLNDGTRPSPKATLTSALRQAREWRRTDDERVRGGIT
ICMEGGTYALYEPVFIRPEDSGTEDSPTVIRPVADEKVVLSGGIRIGGWK
KQGKLWVADVPMFNGRPLDFRQLWVNGKKAVRARDVEDFEKMNRICSVDE
KNEILYVPAVAIRRLVDGKGALKAKYAEMVLHQMWCVANLRIRSVELAGD
SAAIRFHQPESRIQFEHPWPRPMVTTDGHNSAFYLTNARELLDVAGEWYH
DIDARKVYYYPREGEKLQDAGTEVIVPAIETLIQVKGTFDRPVSHIRFEK
ITFSHTTWMRPSEKGHVPLQAGMYLTDGYRIDPKMERDYLNHPLDNQGWL
GRPAAAVSVAAANQIDFERCRFDHLGSTGLDYEEAVQGGVVRGCLFRDIA
GNGLVVGSFSPAAHETHLPYDPTDLREVCAHQQISNCYFTEVGNEDWGCL
AILAGYVKDINIEHNEICEVPYSGISLGWGWTQTVNCMRNNRVHANLIHH
YAKHMYDVAGVYTLGSQPKSYVTENCVHSIYKPGYVHDPNHWFYLYTDEG
SSFITVRDNWTEGEKYLQNANGPGNVWENNGPQVDTVIRERAGLEAEYRD
LK
3D structure
PDB5mqp The most complex carbohydrate known is degraded in the human gut by single organisms and not bacterial consortia
ChainE
Resolution2.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.1.22: alpha-galactosidase.
3.2.1.n1: blood group B branched chain alpha-1,3-galactosidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA E R150 L257 D259 E263 R134 L241 D243 E247
BS02 CA E E21 R60 R62 G64 E5 R44 R46 G48
External links