Structure of PDB 5l2k Chain E

Receptor sequence

>5l2kE (length=242) Species: 9606 (Homo sapiens) [Search protein sequence]

AGVTQTPKFRVLKTGQSMTLLCAQDMNHEYMYWYRQDPGMGLRLIHYSVG
EGTTAKGEVPDGYNVSRLKKQNFLLGLESAAPSQTSVYFCASSPRLAGDE
QFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYP
DHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQ
NPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD

3D structure

PDB

5l2k T cell receptor recognition of CD1b presenting a mycobacterial glycolipid.

Chain

Resolution

3.2 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	70E	E	Y31 R109 L110 A111 D113	Y30 R95 L96 A97 D99

External links

PDB	RCSB:5l2k, PDBe:5l2k, PDBj:5l2k
PDBsum	5l2k
PubMed	27807341

[Back to BioLiP]