Structure of PDB 5js9 Chain E

Receptor sequence

>5js9E (length=224) Species: 9606 (Homo sapiens) [Search protein sequence]

QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIG
QIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCT
TTSTYDKWSGLHHDGVMAFSSWGQGTLISVSAASTKGPSVFPLAPSSGTA
ALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPS
TQTYICNVNHKPSNTKVDKKVEPK

3D structure

PDB

5js9 Uncleaved prefusion-optimized gp140 trimers derived from analysis of HIV-1 envelope metastability.

Chain

Resolution

6.918 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	BMA	E	S70 A71	S70 A71
BS02	MAN	E	S70 S82 S83	S70 S82 S83
BS03	MAN	E	T19 L68 E85	T19 L68 E85
BS04	MAN	E	S57 S58 A59 R64 G65 V67	S57 S58 A59 R64 G65 V67

External links

PDB	RCSB:5js9, PDBe:5js9, PDBj:5js9
PDBsum	5js9
PubMed	27349805

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